STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105909458Protein phosphatase 1A-like. (410 aa)    
Predicted Functional Partners:
ENSCHAP00000004804
Mitogen-activated protein kinase kinase 7.
   
 0.864
ENSCHAP00000035287
Protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative).
  
  
 
0.831
LOC105899712
Protein phosphatase 1A-like.
  
  
 
0.830
med21
Mediator complex subunit 21.
    
  0.744
ENSCHAP00000048371
Mediator complex subunit 14.
    
  0.744
med22
Mediator complex subunit 22.
   
  0.744
ENSCHAP00000051830
annotation not available
    
  0.744
ENSCHAP00000048013
Mitogen-activated protein kinase kinase kinase 7.
  
 0.724
LOC105894965
Dual specificity mitogen-activated protein kinase kinase 6-like.
    
 0.721
LOC105893604
Dual specificity mitogen-activated protein kinase kinase 6-like.
    
 0.721
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.