STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000000928Si:dkey-274m17.3. (139 aa)    
Predicted Functional Partners:
LOC105911499
Chromosome unknown open reading frame, human C18orf54.
      
 0.539
DONSON
Downstream neighbor of SON.
      
 0.528
ENSCHAP00000041100
Zinc finger protein 367.
      
 0.526
ENSCHAP00000041632
Mitochondrial genome maintenance exonuclease 1.
      
 0.525
ttc1
Tetratricopeptide repeat domain 1.
      
 0.517
ENSCHAP00000040023
Centrosomal protein 89.
    
 
 0.471
ENSCHAP00000045368
Coiled-coil domain containing 77.
      
 0.431
ENSCHAP00000045494
annotation not available
      
 0.431
ENSCHAP00000048227
RIB43A domain with coiled-coils 1.
      
 0.400
ENSCHAP00000054950
RIB43A domain with coiled-coils 2.
      
 0.400
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.