STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105895294Bicaudal D-related protein 2-like. (444 aa)    
Predicted Functional Partners:
ENSCHAP00000016391
Macrophage stimulating 1 receptor b.
    
  0.752
ENSCHAP00000041906
Macrophage stimulating 1 receptor a.
    
  0.752
ENSCHAP00000053649
MET proto-oncogene, receptor tyrosine kinase.
    
  0.752
ENSCHAP00000034081
Protein tyrosine kinase 7a.
    
  0.631
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.631
ENSCHAP00000027391
WD repeat domain 90.
    
 0.577
ripk4
Receptor interacting serine/threonine kinase 4.
   
  0.569
ENSCHAP00000028778
annotation not available
    
  0.484
ENSCHAP00000000012
annotation not available
    
  0.447
ENSCHAP00000000125
annotation not available
    
  0.447
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.