STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000000944annotation not available (286 aa)    
Predicted Functional Partners:
ENSCHAP00000000875
FERM and PDZ domain containing 2.
 
  
  0.790
ENSCHAP00000056429
Rap guanine nucleotide exchange factor (GEF) 6.
    
 0.787
gab1
GRB2 associated binding protein 1.
    
 0.713
ENSCHAP00000016153
APC regulator of WNT signaling pathway.
   
 
 0.706
ENSCHAP00000018843
APC regulator of WNT signaling pathway 2.
   
 
 0.706
ENSCHAP00000042348
Rap guanine nucleotide exchange factor (GEF) 2.
    
 
 0.686
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
 
 0.686
ENSCHAP00000047954
Si:dkey-253i9.4.
    
 
 0.686
ENSCHAP00000029982
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1a.
    
  0.681
ENSCHAP00000005325
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 0.678
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.