STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000000985Selenoprotein T, 1a. (178 aa)    
Predicted Functional Partners:
ENSCHAP00000010139
Selenoprotein F.
   
  
 0.622
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA specific.
   
  
 0.569
selenok
Selenoprotein K.
      
 0.568
SECISBP2L
SECIS binding protein 2 like.
   
 
 0.558
ENSCHAP00000020639
Selenoprotein M.
      
 0.547
ENSCHAP00000037017
Selenoprotein N.
      
 0.538
txnrd2
Thioredoxin reductase 2.
      
 0.534
eif2s3
Eukaryotic translation initiation factor 2 subunit gamma.
   
  
 0.529
ENSCHAP00000055050
Selenoprotein I.
      
 0.529
ENSCHAP00000021410
Selenoprotein W, 2a.
      
 0.526
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.