STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC7A1Solute carrier family 7 member 1. (655 aa)    
Predicted Functional Partners:
ENSCHAP00000016391
Macrophage stimulating 1 receptor b.
    
  0.808
ENSCHAP00000041906
Macrophage stimulating 1 receptor a.
    
  0.808
ENSCHAP00000053649
MET proto-oncogene, receptor tyrosine kinase.
    
  0.808
ENSCHAP00000052209
Si:ch211-153b23.3.
   
 0.711
ENSCHAP00000040629
Solute carrier family 3 member 1.
  
 0.637
slc3a2
Solute carrier family 3 member 2.
  
 0.618
LOC105899720
4F2 cell-surface antigen heavy chain-like.
  
 0.618
LOC105894160
4F2 cell-surface antigen heavy chain-like.
  
 0.618
ENSCHAP00000036655
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.614
ENSCHAP00000001297
alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
  
 0.573
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.