STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001034Eukaryotic translation initiation factor 3, subunit C. (959 aa)    
Predicted Functional Partners:
eif3d
Eukaryotic translation initiation factor 3 subunit D.
   
 0.999
eif3h
Eukaryotic translation initiation factor 3 subunit H.
   
 0.999
ENSCHAP00000016659
Eukaryotic translation initiation factor 3, subunit F.
   
 0.999
eif2s3
Eukaryotic translation initiation factor 2 subunit gamma.
   
 0.999
ENSCHAP00000019442
Danio rerio selenoprotein P2 (selenop2), mRNA.
   
 0.999
eif3l
Eukaryotic translation initiation factor 3 subunit L.
   
 0.999
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.999
eif3g
Eukaryotic translation initiation factor 3 subunit G.
   
 0.999
ENSCHAP00000038186
Eukaryotic translation initiation factor 3, subunit 10 (theta).
   
 0.999
abce1
ATP binding cassette subfamily E member 1.
   
 0.999
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.