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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001045Methionyl aminopeptidase type 1D (mitochondrial). (341 aa)    
Predicted Functional Partners:
etfb
Electron transfer flavoprotein subunit beta.
  
 
 0.955
LOC105902521
Cholesterol desaturase daf-36-like.
  
 
 0.928
iyd
Iodotyrosine deiodinase.
  
 
 0.926
LOC105909048
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial.
  
 
 0.918
ENSCHAP00000021837
Electron transfer flavoprotein subunit alpha.
   
 
 0.907
ENSCHAP00000044661
Fumarate hydratase.
    
 0.882
cryl1
Crystallin lambda 1.
  
 
 0.880
ENSCHAP00000023390
Fumarylacetoacetate hydrolase (fumarylacetoacetase).
    
 0.858
FAHD2A
Fumarylacetoacetate hydrolase domain containing 2A.
    
 0.858
fahd1
Fumarylacetoacetate hydrolase domain containing 1.
    
 0.858
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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