STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001067Peroxisomal biogenesis factor 11 alpha. (237 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
   
 0.988
ENSCHAP00000042236
Peroxisomal biogenesis factor 14.
    
 0.962
pex13
Peroxisomal biogenesis factor 13.
   
 0.959
ENSCHAP00000004539
Peroxisomal biogenesis factor 10.
    
 0.946
pex12
Peroxisomal biogenesis factor 12.
   
 0.934
ENSCHAP00000011890
Family with sequence similarity 185 member A.
    
 0.908
pex2
Peroxisomal biogenesis factor 2.
   
 0.891
ENSCHAP00000007471
Peroxisomal biogenesis factor 3.
   
 0.888
pex11b
Peroxisomal biogenesis factor 11 beta.
  
  
 
0.852
pex16
Peroxisomal biogenesis factor 16.
   
 
 0.845
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.