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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001091SRY-box transcription factor 13. (617 aa)    
Predicted Functional Partners:
ENSCHAP00000022724
Centrosomal protein 85.
    
 
 0.785
ENSCHAP00000056234
SRY-box transcription factor 5.
    
 
0.760
ENSCHAP00000006307
Zgc:92664.
    
  0.670
ENSCHAP00000022278
Zgc:103508.
    
  0.670
trip12
Thyroid hormone receptor interactor 12.
    
 
 0.657
ENSCHAP00000010237
Bromodomain PHD finger transcription factor.
    
  0.650
BPTF
Bromodomain PHD finger transcription factor.
    
  0.650
ENSCHAP00000011383
annotation not available
    
  0.611
LOC105893332
Histone-binding protein RBBP7.
    
  0.611
ENSCHAP00000010671
Junction plakoglobin a.
   
 0.610
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.