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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105906181Elongation of very long chain fatty acids protein 6. (301 aa)    
Predicted Functional Partners:
LOC105911564
Elongation of very long chain fatty acids protein 5-like.
   
 
0.906
ENSCHAP00000009170
annotation not available
     
 0.900
ENSCHAP00000061794
Hydroxysteroid (17-beta) dehydrogenase 12b.
     
 0.871
ENSCHAP00000031673
Hydroxysteroid (17-beta) dehydrogenase 12a.
     
 0.870
ENSCHAP00000019925
3-hydroxyacyl-CoA dehydratase 4.
     
 0.861
LOC105906694
Very-long-chain 3-oxoacyl-CoA reductase-like.
     
 0.861
ENSCHAP00000021307
3-oxoacyl-ACP synthase, mitochondrial.
     
 0.855
ENSCHAP00000045847
ELOVL family member 6, elongation of long chain fatty acids like.
  
 
 
0.850
ENSCHAP00000002666
stearoyl-CoA desaturase b.
   
 0.843
SCD5
stearoyl-CoA desaturase 5.
   
 0.843
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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