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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001147SET and MYND domain containing 1a. (487 aa)    
Predicted Functional Partners:
ENSCHAP00000004205
DOT1-like histone H3K79 methyltransferase.
   
 0.922
ENSCHAP00000037620
SET and MYND domain containing 3.
   
0.884
ENSCHAP00000027219
SET domain containing 1A, histone lysine methyltransferase.
    
 0.879
ENSCHAP00000042546
SET domain containing 1B, histone lysine methyltransferase a.
    
 0.879
LOC105909948
Histone-lysine N-methyltransferase SETMAR.
     
 0.871
ENSCHAP00000033319
Lysine (K)-specific methyltransferase 2E.
    
 0.867
ENSCHAP00000021042
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
   
  0.866
ENSCHAP00000037330
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
   
  0.866
plod2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
  0.866
ENSCHAP00000040083
annotation not available
     
 0.860
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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