STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc22DnaJ heat shock protein family (Hsp40) member C22. (337 aa)    
Predicted Functional Partners:
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 0.786
ENSCHAP00000016042
Heat shock protein 4 like.
  
 0.746
LOC105909189
Heat shock 70 kDa protein 4-like.
  
 0.746
hspa4
Heat shock protein family A (Hsp70) member 4.
  
 0.746
ENSCHAP00000023152
Heat shock protein 9.
  
 0.734
ENSCHAP00000002550
TNF receptor-associated protein 1.
  
 0.719
ENSCHAP00000029009
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
  
 0.719
ENSCHAP00000029858
TSC complex subunit 1a.
  
 0.719
ENSCHAP00000030214
annotation not available
  
 0.719
ENSCHAP00000032552
annotation not available
  
 0.719
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.