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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec61bSEC61 translocon beta subunit. (97 aa)    
Predicted Functional Partners:
ENSCHAP00000018648
SEC63 homolog, protein translocation regulator.
    
 0.999
SEC61G
Protein transport protein Sec61 subunit gamma-like.
   
 0.998
sec61g
SEC61 translocon gamma subunit.
   
 0.998
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.995
ENSCHAP00000026362
Signal sequence receptor, delta.
   
 0.993
ssr3
Signal sequence receptor subunit 3.
   
 0.992
rps2
Ribosomal protein S2.
    
 0.991
ssr2
Signal sequence receptor subunit 2.
   
 0.987
ENSCHAP00000044536
Signal sequence receptor, beta.
   
 0.987
ENSCHAP00000044723
annotation not available
   
 
 0.987
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.