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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001260annotation not available (788 aa)    
Predicted Functional Partners:
drg1
Developmentally regulated GTP binding protein 1.
    
   0.737
ENSCHAP00000026295
Zgc:193812.
    
   0.737
LOC105896235
Chromosome unknown open reading frame, human CXorf56.
    
   0.737
ENSCHAP00000050893
Polymerase (DNA directed), epsilon 2.
    
   0.737
ctsz
Cathepsin Z.
   
 0.658
ENSCHAP00000021749
annotation not available
   
 0.658
cs
Citrate synthase.
   
   0.636
CS
Citrate synthase.
   
   0.636
ENSCHAP00000012549
Si:dkey-178e17.1.
    
   0.630
LOC105890537
Tricarboxylate transport protein, mitochondrial-like.
    
   0.630
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.