STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001289annotation not available (390 aa)    
Predicted Functional Partners:
ENSCHAP00000011963
Apoptotic peptidase activating factor 1.
    
 0.884
ENSCHAP00000002698
HESX homeobox 1.
    
 0.870
ENSCHAP00000044126
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 0.870
ENSCHAP00000062823
Baculoviral IAP repeat containing 6.
   
 0.761
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
  0.697
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.659
ENSCHAP00000037787
Centromere protein N.
   
 0.633
LOC105907628
Centromere protein M-like.
   
 0.603
ENSCHAP00000046742
annotation not available
   
 0.598
tradd
TNFRSF1A associated via death domain.
    
 0.595
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.