STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001294annotation not available (206 aa)    
Predicted Functional Partners:
syne3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.949
ENSCHAP00000008387
annotation not available
    
 0.828
ENSCHAP00000008630
annotation not available
    
 0.828
ENSCHAP00000009367
annotation not available
    
 0.828
ENSCHAP00000031790
annotation not available
    
 0.828
ENSCHAP00000032634
annotation not available
    
 0.828
ENSCHAP00000041464
Spectrin repeat containing, nuclear envelope 1b.
    
 0.828
SUN1
Sad1 and UNC84 domain containing 1.
  
  
0.816
LOC105892977
Nesprin-3-like.
    
 0.803
ENSCHAP00000007017
annotation not available
    
 0.754
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.