STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001365annotation not available (409 aa)    
Predicted Functional Partners:
ENSCHAP00000017116
Fibrinogen alpha chain.
   
 
 0.964
ENSCHAP00000035123
Protein C (inactivator of coagulation factors Va and VIIIa), a.
  
 0.951
fgg
Fibrinogen gamma chain.
   
 
 0.932
ENSCHAP00000016980
Fibrinogen beta chain.
   
 
 0.924
ENSCHAP00000052473
Fibronectin 1b.
     
 0.824
ENSCHAP00000011208
annotation not available
   
 0.766
ENSCHAP00000044752
Fibronectin 1a.
   
 0.766
ENSCHAP00000018193
Serpin peptidase inhibitor, clade C (antithrombin), member 1.
  
  
0.736
ENSCHAP00000014172
Plasminogen activator, tissue.
   
 0.704
ENSCHAP00000026662
Plasminogen activator, urokinase a.
   
 0.680
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.