STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105906519Heterogeneous nuclear ribonucleoprotein C-like. (212 aa)    
Predicted Functional Partners:
ENSCHAP00000043344
annotation not available
   
 0.895
ENSCHAP00000032571
RNA binding motif protein X-linked.
   
 0.864
hnrnpa1
Heterogeneous nuclear ribonucleoprotein A1.
   
 0.863
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.863
hnrnpc
Heterogeneous nuclear ribonucleoprotein C.
   
0.846
LOC105889520
Heterogeneous nuclear ribonucleoprotein C-like.
   
0.846
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.814
LOC105890375
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.808
ENSCHAP00000054417
Heterogeneous nuclear ribonucleoprotein K.
   
 0.808
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.781
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.