STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001409FKBP prolyl isomerase 16. (519 aa)    
Predicted Functional Partners:
ENSCHAP00000029009
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.762
ENSCHAP00000032552
annotation not available
   
 0.762
ENSCHAP00000046354
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.762
ENSCHAP00000048178
Si:ch211-131k2.3.
   
 0.762
ENSCHAP00000017242
Ubiquitin specific peptidase 30.
    
 0.761
LOC105891347
Apoptosis regulator Bcl-2-like.
    
 
 0.749
LOC105889308
Apoptosis regulator Bcl-2-like.
    
 
 0.749
LOC105906841
Prostaglandin E synthase 3-like.
   
 0.749
LOC105897344
Prostaglandin E synthase 3-like.
   
 0.749
ENSCHAP00000006601
Regulatory associated protein of MTOR, complex 1.
    
 
 0.740
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.