STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105902063Upstream stimulatory factor 2-like. (350 aa)    
Predicted Functional Partners:
usf1
Upstream transcription factor 1.
  
 
0.971
ENSCHAP00000001851
annotation not available
    
 0.709
ENSCHAP00000024681
E1A binding protein p300 a.
    
 0.692
ENSCHAP00000031900
E1A binding protein p300 b.
    
 0.692
ENSCHAP00000025501
CREB binding protein a.
    
 0.682
LOC105889819
Protein max-like.
    
 0.641
MAX
MYC associated factor X.
    
 0.641
ENSCHAP00000043218
annotation not available
    
 0.641
ncoa1
Nuclear receptor coactivator 1.
    
 0.629
ENSCHAP00000020685
Nuclear receptor coactivator 3.
    
 0.629
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.