STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc42se2CDC42 small effector 2. (85 aa)    
Predicted Functional Partners:
ENSCHAP00000037373
Heat shock protein 90, beta (grp94), member 1.
  
 0.912
hyou1
Hypoxia up-regulated 1.
  
 0.899
ENSCHAP00000011930
Heat shock protein 5.
  
 0.894
ENSCHAP00000012252
annotation not available
  
 0.894
ENSCHAP00000058341
Ankyrin repeat domain 45.
  
 0.894
cct5
Chaperonin containing TCP1 subunit 5.
  
 0.850
cct2
Chaperonin containing TCP1 subunit 2.
  
 0.846
ENSCHAP00000010391
Chaperonin containing TCP1, subunit 7 (eta).
  
 0.843
cct6a
Chaperonin containing TCP1 subunit 6A.
  
 0.843
ENSCHAP00000051403
Cell division cycle 37-like 1.
    
 0.829
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.