STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001469Dishevelled segment polarity protein 3a. (637 aa)    
Predicted Functional Partners:
VANGL1
VANGL planar cell polarity protein 1.
    
 0.950
ENSCHAP00000001914
Axin 1.
   
 0.947
ENSCHAP00000007390
annotation not available
   
 0.947
ENSCHAP00000027948
Axin 2 (conductin, axil).
   
 0.943
AXIN2
Axin 2.
   
 0.942
ENSCHAP00000046795
VANGL planar cell polarity protein 2.
    
 0.937
ENSCHAP00000028055
Danio rerio NKD inhibitor of WNT signaling pathway 2a (nkd2a), mRNA.
    
 0.936
ENSCHAP00000029119
NKD inhibitor of WNT signaling pathway 1.
    
 0.936
ENSCHAP00000038324
Prickle homolog 1a.
    
 0.920
ENSCHAP00000050374
Frizzled class receptor 4.
   
 0.916
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.