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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001474Forkhead box M1. (673 aa)    
Predicted Functional Partners:
cenpf
Centromere protein F.
   
 
 0.964
ccna1
Cyclin A1.
   
 
 0.939
ccna2
Cyclin A2.
   
 
 0.939
ENSCHAP00000016734
Maternal embryonic leucine zipper kinase.
   
 0.935
mybl2
MYB proto-oncogene like 2.
   
 0.926
ENSCHAP00000041991
Lin-37 DREAM MuvB core complex component.
    
 0.918
ENSCHAP00000009576
Cell division cycle associated 8.
   
 
 0.916
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.910
ENSCHAP00000040372
Lin-52 DREAM MuvB core complex component.
     
 0.907
ENSCHAP00000018333
annotation not available
   
  
 0.897
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.