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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001476annotation not available (374 aa)    
Predicted Functional Partners:
ENSCHAP00000010505
Excision repair cross-complementation group 4.
   
 0.999
ENSCHAP00000054339
annotation not available
   
 0.999
ENSCHAP00000035080
Xeroderma pigmentosum, complementation group A.
    
 0.997
fancl
FA complementation group L.
    
 0.987
ENSCHAP00000041952
FA complementation group G.
    
 0.987
ENSCHAP00000026628
annotation not available
   
 0.986
ENSCHAP00000026655
annotation not available
   
 0.986
ENSCHAP00000061364
FA complementation group B.
    
 0.984
ENSCHAP00000043674
mutS homolog 6 (E. coli).
    
 0.979
ENSCHAP00000053145
mutS homolog 3 (E. coli).
    
 0.979
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.