STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcoln1Mucolipin 1. (580 aa)    
Predicted Functional Partners:
ENSCHAP00000010676
Mucolipin 2.
  
  
 
0.799
MCOLN3
Mucolipin 3.
  
  
 
0.761
ENSCHAP00000031569
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.699
ENSCHAP00000047986
Transient receptor potential cation channel, subfamily A, member 1b.
     
 0.509
ENSCHAP00000060816
Transient receptor potential cation channel, subfamily A, member 1a.
     
 0.509
LOC105905455
Transient receptor potential cation channel subfamily V member 5-like.
     
 0.451
LOC105909622
Transient receptor potential cation channel subfamily V member 1-like.
     
 0.451
ENSCHAP00000038743
annotation not available
     
 0.451
TRPV2
Transient receptor potential cation channel subfamily V member 2.
     
 0.451
ENSCHAP00000060420
Transient receptor potential cation channel, subfamily V, member 4.
     
 0.451
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.