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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001550KN motif and ankyrin repeat domains 1a. (1399 aa)    
Predicted Functional Partners:
ENSCHAP00000021001
Kinesin family member 21A.
    
 
 0.795
KIF21A
Kinesin family member 21A.
    
 
 0.773
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.669
ENSCHAP00000019593
Solute carrier family 4 member 4a.
    
 0.613
mars1
methionyl-tRNA synthetase 1.
   
 0.611
ENSCHAP00000011314
Katanin p60 subunit A-like 2.
   
 0.588
ENSCHAP00000022879
UBX domain protein 7.
    
 0.577
LOC105895537
Eukaryotic initiation factor 4A-I-like.
   
  0.566
eif4a2
Eukaryotic translation initiation factor 4A2.
   
  0.566
ENSCHAP00000061427
Growth arrest-specific 1a.
      
 0.557
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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