STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGR6Leucine rich repeat containing G protein-coupled receptor 6. (902 aa)    
Predicted Functional Partners:
ENSCHAP00000035464
R-spondin 1.
    
 0.947
ENSCHAP00000043710
R-spondin 4.
    
 0.940
ENSCHAP00000011525
annotation not available
   
 0.920
ENSCHAP00000043508
R-spondin 2.
    
 0.893
ENSCHAP00000038669
R-spondin 3.
    
 0.892
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
  
0.870
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
  
0.869
LOC105898159
Clupea harengus gonadotropin subunit beta-2 (LOC105898159), mRNA.
   
 0.846
ENSCHAP00000037565
annotation not available
    
 0.780
gnas
GNAS complex locus.
    
 0.780
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.