ENSCHAP00000001580 protein (Clupea harengus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCHAP00000001580

annotation not available (148 aa)

Predicted Functional Partners:

ENSCHAP00000001258

0.939

ENSCHAP00000001208

0.938

ENSCHAP00000001171

0.937

ENSCHAP00000001149

0.936

ENSCHAP00000015233

0.935

ENSCHAP00000001509

0.608

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSCHAP00000001149	ENSCHAP00000001580	annotation not available	annotation not available	0.936
ENSCHAP00000001171	ENSCHAP00000001580	annotation not available	annotation not available	0.937
ENSCHAP00000001208	ENSCHAP00000001580	annotation not available	annotation not available	0.938
ENSCHAP00000001258	ENSCHAP00000001580	annotation not available	annotation not available	0.939
ENSCHAP00000001509	ENSCHAP00000001580	annotation not available	annotation not available	0.608
ENSCHAP00000001580	ENSCHAP00000001149	annotation not available	annotation not available	0.936
ENSCHAP00000001580	ENSCHAP00000001171	annotation not available	annotation not available	0.937
ENSCHAP00000001580	ENSCHAP00000001208	annotation not available	annotation not available	0.938
ENSCHAP00000001580	ENSCHAP00000001258	annotation not available	annotation not available	0.939
ENSCHAP00000001580	ENSCHAP00000001509	annotation not available	annotation not available	0.608
ENSCHAP00000001580	ENSCHAP00000015233	annotation not available	annotation not available	0.935
ENSCHAP00000015233	ENSCHAP00000001580	annotation not available	annotation not available	0.935