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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001602Phosphatase domain containing paladin 1b. (867 aa)    
Predicted Functional Partners:
ENSCHAP00000000418
Ribosomal protein S21.
   
 0.999
ENSCHAP00000000935
Ribosomal protein S26.
   
 0.999
ENSCHAP00000007939
Ribosomal protein S28.
  
 0.999
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.999
rps10
Ribosomal protein S10.
   
 0.999
rps18
Ribosomal protein S18.
   
 0.999
rps9
Ribosomal protein S9.
   
 0.999
rps11
Ribosomal protein S11.
   
 0.999
rps7
Ribosomal protein S7.
   
 0.999
rps3
Ribosomal protein S3.
   
 0.999
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.