STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001670annotation not available (990 aa)    
Predicted Functional Partners:
LOC105897688
Serine/threonine-protein phosphatase alpha-2 isoform-like.
   
 0.826
ENSCHAP00000011184
Protein phosphatase 1, catalytic subunit, alpha isozyme b.
   
 0.826
LOC105902522
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit.
   
 0.826
ENSCHAP00000039121
Protein phosphatase 1, regulatory subunit 42.
    
  0.819
ENSCHAP00000028374
annotation not available
   
 0.812
ENSCHAP00000002415
annotation not available
    
 0.787
ENSCHAP00000030601
annotation not available
    
 0.787
bmt2
Base methyltransferase of 25S rRNA 2 homolog.
    
 0.787
ENSCHAP00000061772
UBX domain protein 10.
   
    0.773
shoc2
SHOC2 leucine rich repeat scaffold protein.
    
  0.761
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.