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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001742Monoacylglycerol O-acyltransferase 3b. (365 aa)    
Predicted Functional Partners:
ENSCHAP00000013739
Diacylglycerol O-acyltransferase 1b.
    
 0.923
LOC105904953
Diacylglycerol O-acyltransferase 1-like.
    
 0.922
ENSCHAP00000012655
Lipin 1.
    
 0.899
ENSCHAP00000009604
Lipin 2.
    
 0.884
LPIN2
Lipin 2.
    
 0.884
ENSCHAP00000058147
Si:ch73-21k16.1.
    
 0.884
ephx2
Epoxide hydrolase 2.
   
 
 0.877
ENSCHAP00000008548
annotation not available
   
 
 0.867
ENSCHAP00000010956
Patatin-like phospholipase domain containing 2.
   
 
 0.867
ENSCHAP00000004062
Phospholipid phosphatase 2a.
     
 0.861
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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