STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001750Guanylate kinase 1b. (241 aa)    
Predicted Functional Partners:
ppil6
Peptidylprolyl isomerase like 6.
   
 0.922
ENSCHAP00000049610
annotation not available
  
 0.871
ENSCHAP00000058691
NME/NM23 family member 8.
  
 0.871
aprt
Adenine phosphoribosyltransferase.
  
 
 0.782
ENSCHAP00000011057
Adenylate kinase 4.
   
 0.763
gmps
Guanine monophosphate synthase.
  
 
 0.742
ENSCHAP00000022615
Adenylate kinase 7a.
   
 0.719
ak8
Adenylate kinase 8.
   
 0.719
ENSCHAP00000043670
Adenylate kinase 7b.
   
 0.719
GNAT2
Guanine nucleotide-binding protein G(t) subunit alpha-3-like.
   
 
 0.712
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.