STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001791annotation not available (236 aa)    
Predicted Functional Partners:
ENSCHAP00000051618
annotation not available
  
 0.978
ENSCHAP00000050629
Centrosomal protein 290.
    
 
 0.933
LOC105908670
Cystathionine beta-synthase-like.
   
 0.884
shmt2
Serine hydroxymethyltransferase 2.
  
 
 0.882
ENSCHAP00000061454
Cyclin F.
    
 
 0.873
ENSCHAP00000055742
annotation not available
    
 0.850
ENSCHAP00000059885
annotation not available
    
 0.850
ENSCHAP00000002569
Glutathione synthetase.
     
 0.845
ENSCHAP00000017230
Glutamate-cysteine ligase, modifier subunit.
   
  0.841
chac2
ChaC cation transport regulator homolog 2.
     
 0.831
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.