STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgf16Fibroblast growth factor 16. (204 aa)    
Predicted Functional Partners:
ENSCHAP00000048274
Fibroblast growth factor receptor 3.
    
 0.954
ENSCHAP00000014857
Fibroblast growth factor receptor 2.
    
 0.950
ENSCHAP00000060066
Fibroblast growth factor receptor 1b.
    
 0.949
ENSCHAP00000061797
annotation not available
    
 0.947
ENSCHAP00000043663
Fibroblast growth factor receptor 1a.
    
 0.942
ENSCHAP00000010756
Platelet-derived growth factor receptor, alpha polypeptide.
   
 0.909
ENSCHAP00000035307
annotation not available
   
 0.903
ENSCHAP00000006669
Fms-related tyrosine kinase 4.
   
 0.902
ENSCHAP00000022623
Kinase insert domain receptor (a type III receptor tyrosine kinase).
   
 0.902
ENSCHAP00000050753
Kinase insert domain receptor like.
   
 0.902
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.