Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001855annotation not available (139 aa)    
Predicted Functional Partners:
ENSCHAP00000007044
annotation not available
  
 
  0.491
ENSCHAP00000055914
Netrin g1a.
    
 0.458
ENSCHAP00000009462
annotation not available
  
 
  0.442
ENSCHAP00000004328
annotation not available
  
  0.438
ENSCHAP00000006996
annotation not available
  
 
  0.437
ENSCHAP00000007982
T-cell receptor alpha/delta variable 22.0.
  
 
  0.429
ENSCHAP00000004533
T-cell receptor alpha/delta variable 14.0.
  
  0.422
ENSCHAP00000000564
Solute carrier family 6 member 5.
    
   0.421
ENSCHAP00000007176
annotation not available
  
 
  0.421
ENSCHAP00000014084
annotation not available
    
   0.421
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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