STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001913Neural precursor cell expressed, developmentally down-regulated 9. (764 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.934
ENSCHAP00000021246
Translocase of outer mitochondrial membrane 20.
    
 0.927
ENSCHAP00000030862
AT rich interactive domain 4A (RBP1-like).
    
 0.927
crk
CRK proto-oncogene, adaptor protein.
    
 0.876
crkl
CRK like proto-oncogene, adaptor protein.
    
 0.876
ENSCHAP00000039104
annotation not available
    
 0.876
ENSCHAP00000023085
Protein tyrosine kinase 2 beta, b.
    
 0.846
ENSCHAP00000028996
Protein tyrosine kinase 2 beta, a.
    
 0.846
ENSCHAP00000031111
Protein tyrosine kinase 2ab.
    
 0.846
ENSCHAP00000055099
Protein tyrosine kinase 2aa.
    
 0.846
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.