STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000001921Nei-like DNA glycosylase 3. (526 aa)    
Predicted Functional Partners:
ENSCHAP00000017284
Nth-like DNA glycosylase 1.
  
  
 0.907
coasy
Coenzyme A synthase.
  
  
 0.902
dcakd
dephospho-CoA kinase domain containing.
  
  
 0.902
ENSCHAP00000033992
Zgc:110269.
  
  
 0.896
fen1
Flap structure-specific endonuclease 1.
  
  
 0.896
ENSCHAP00000020403
Discs, large (Drosophila) homolog-associated protein 5.
   
    0.836
ENSCHAP00000045505
Polymerase (DNA directed), gamma.
  
  
 0.807
ENSCHAP00000048590
annotation not available
  
  
 0.807
ENSCHAP00000058425
Polymerase (DNA directed), theta.
  
  
 0.807
ENSCHAP00000060536
Helicase, POLQ like.
  
  
 0.807
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.