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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD12Sterile alpha motif domain containing 12. (232 aa)    
Predicted Functional Partners:
ksr1
Kinase suppressor of ras 1.
    
 0.632
ENSCHAP00000013496
Kinase suppressor of ras 2.
    
 0.632
ENSCHAP00000004241
Connector enhancer of kinase suppressor of Ras 2b.
    
 0.585
ENSCHAP00000022655
annotation not available
    
 0.585
ipcef1
Interaction protein for cytohesin exchange factors 1.
    
 0.585
ENSCHAP00000023140
Cnksr family member 3.
    
 0.585
ENSCHAP00000044180
Si:ch211-26b3.4.
    
 0.585
ENSCHAP00000054970
Connector enhancer of kinase suppressor of Ras 2a.
    
 0.585
ENSCHAP00000008980
Connector enhancer of kinase suppressor of Ras 1.
    
 0.582
raf1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 0.460
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.