STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002045DEXH (Asp-Glu-X-His) box polypeptide 58. (441 aa)    
Predicted Functional Partners:
ENSCHAP00000062558
Interferon induced with helicase C domain 1.
  
0.972
ENSCHAP00000014285
annotation not available
  
0.968
ENSCHAP00000004969
Ubiquitin specific peptidase 18.
   
 
 0.963
ENSCHAP00000024514
WRN RecQ like helicase.
   
 0.950
fancl
FA complementation group L.
    
 0.945
ENSCHAP00000041952
FA complementation group G.
    
 0.944
ENSCHAP00000056281
FA complementation group F.
    
 0.937
ENSCHAP00000061364
FA complementation group B.
   
 0.937
ENSCHAP00000057806
DNA topoisomerase III beta.
   
 0.927
ENSCHAP00000014529
annotation not available
   
 0.926
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.