Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC105911732Neuropeptide FF receptor 1-like. (468 aa)    
Predicted Functional Partners:
ENSCHAP00000062876
Neuropeptide FF-amide peptide precursor like.
    
 0.986
ENSCHAP00000011211
annotation not available
     
 0.971
ENSCHAP00000023576
Neuromedin U.
    
 0.702
LOC105904870
Arrestin red cell isoform 1-like.
   
 0.612
ENSCHAP00000018535
Arrestin, beta 1.
   
 0.612
LOC105902401
Arrestin red cell isoform 1.
   
 0.612
ENSCHAP00000034886
S-antigen; retina and pineal gland (arrestin) a.
   
 0.612
ENSCHAP00000051857
S-antigen; retina and pineal gland (arrestin) b.
   
 0.612
ENSCHAP00000055850
Arrestin 3a, retinal (X-arrestin).
   
 0.612
ENSCHAP00000055935
Arrestin 3a, retinal (X-arrestin).
   
 0.612
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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