STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002187annotation not available (599 aa)    
Predicted Functional Partners:
ENSCHAP00000019849
Nuclear receptor corepressor 2.
    
 0.677
ENSCHAP00000031150
Nuclear receptor corepressor 1.
    
 0.677
HDAC2
Histone deacetylase 2.
    
 0.664
LOC105892066
Probable histone deacetylase 1-B.
    
 0.664
hdac8
Histone deacetylase 8.
    
 0.664
ENSCHAP00000027667
Cullin 3a.
    
 0.655
RARB
Retinoic acid receptor beta.
    
 0.641
ENSCHAP00000011472
Retinoic acid receptor, alpha b.
    
 0.641
ENSCHAP00000029901
Retinoic acid receptor, alpha a.
    
 0.641
ENSCHAP00000034019
Retinoic acid receptor, gamma b.
    
 0.641
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.