STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPY19L4Dpy-19 like 4. (809 aa)    
Predicted Functional Partners:
ENSCHAP00000054548
Cancer susceptibility candidate 1.
   
    0.590
ENSCHAP00000050132
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.542
ccnq
Cyclin Q.
      
 0.521
ENSCHAP00000019409
Nucleolar complex associated 4 homolog.
      
 0.519
ENSCHAP00000043159
Zgc:103482.
      
 0.515
ENSCHAP00000048002
Sorting nexin 13.
   
    0.478
ENSCHAP00000007991
Coenzyme Q5, methyltransferase.
      
 0.435
ska1
Spindle and kinetochore associated complex subunit 1.
      
 0.426
ENSCHAP00000001447
Transmembrane O-mannosyltransferase targeting cadherins 2b.
   
  
 0.416
ENSCHAP00000026841
TSR3 ribosome maturation factor.
      
 0.406
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.