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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002218annotation not available (728 aa)    
Predicted Functional Partners:
ENSCHAP00000062823
Baculoviral IAP repeat containing 6.
   
 0.866
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.842
rps27a
Ribosomal protein S27a.
    
 0.814
ENSCHAP00000030857
annotation not available
    
  0.786
ENSCHAP00000000456
annotation not available
   
 0.775
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.770
tradd
TNFRSF1A associated via death domain.
    
 0.744
ENSCHAP00000045730
Zinc finger, AN1-type domain 4.
    
 0.732
ENSCHAP00000001336
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.717
ENSCHAP00000005542
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.717
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.