STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35D3Solute carrier family 35 member D3. (422 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
   
 
 0.607
ENSCHAP00000045005
Si:ch73-71c20.5.
      
 0.540
ENSCHAP00000016710
Lysophospholipase like 1.
      
 0.529
ENSCHAP00000055460
Solute carrier family 35 member B4.
   
  
 0.524
ENSCHAP00000062123
Solute carrier family 35 member B3.
   
  
 0.524
sec61b
SEC61 translocon beta subunit.
      
 0.520
slc35b2
Solute carrier family 35 member B2.
   
  
 0.454
LOC105894893
Transmembrane protein 230-like.
      
 0.449
LOC105888828
Transmembrane protein 230-like.
      
 0.449
slc35a5
Solute carrier family 35 member A5.
   
  
 0.443
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.