STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002271SPC25 component of NDC80 kinetochore complex. (260 aa)    
Predicted Functional Partners:
ENSCHAP00000046868
NDC80 kinetochore complex component.
   
 0.999
nuf2
NUF2 component of NDC80 kinetochore complex.
   
 0.999
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.998
ENSCHAP00000020972
MIS12 kinetochore complex component.
    
 0.979
ENSCHAP00000049093
annotation not available
   
 0.978
ENSCHAP00000058921
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.978
mad2l1
Mitotic arrest deficient 2 like 1.
   
 
 0.967
dsn1
DSN1 component of MIS12 kinetochore complex.
   
 0.966
LOC105912842
Uncharacterized LOC105912842.
   
 0.958
LOC105900091
Kinetochore-associated protein NSL1 homolog.
   
 0.955
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.