STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002400ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. (777 aa)    
Predicted Functional Partners:
RAB35
Ras-related protein Rab-35-like.
    
 
 0.728
RAB35-2
RAB35, member RAS oncogene family.
    
 
 0.728
ENSCHAP00000002698
HESX homeobox 1.
    
 
0.714
ENSCHAP00000044126
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
0.714
arfgap1
ADP ribosylation factor GTPase activating protein 1.
   
0.708
ENSCHAP00000011036
ADP-ribosylation factor 6a.
    
 0.690
ENSCHAP00000002398
ADP-ribosylation factor GTPase activating protein 3.
    
0.637
ENSCHAP00000048926
ADP-ribosylation factor GTPase activating protein 2.
    
0.637
ENSCHAP00000021041
ADP-ribosylation factor-like 15b.
    
 0.621
ENSCHAP00000056533
ADP-ribosylation factor-like 15a.
    
 0.621
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.