STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002442Cytochrome P450, family 1, subfamily A. (520 aa)    
Predicted Functional Partners:
UGT1A1
UDP-glucuronosyltransferase-like.
   
 0.932
ENSCHAP00000028495
Transmembrane O-methyltransferase.
   
 
 0.906
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
    
 0.906
CYP26C1
Cytochrome P450 26C1-like.
  
  
 0.905
ENSCHAP00000008310
Cytochrome P450, family 26, subfamily C, polypeptide 1.
  
  
 0.904
GSTP1
Glutathione S-transferase pi 1.
   
 
 0.903
LOC105895513
Cytochrome P450 26B1.
  
0.901
ENSCHAP00000051000
UDP glucuronosyltransferase 1 family, polypeptide B5.
   
 0.893
CYP19A1
Brain aromatase-like.
  
  
0.892
LOC105889015
Aromatase-like.
  
  
0.891
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.