STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002451annotation not available (695 aa)    
Predicted Functional Partners:
ENSCHAP00000044281
Protection of telomeres 1 homolog.
    
 0.998
ENSCHAP00000057469
TERF1 (TRF1)-interacting nuclear factor 2.
    
 0.998
ENSCHAP00000041304
annotation not available
    
 0.997
ENSCHAP00000002570
Telomerase reverse transcriptase.
    
 0.995
ENSCHAP00000005364
annotation not available
    
 0.995
ENSCHAP00000024514
WRN RecQ like helicase.
    
 0.988
stn1
STN1 subunit of CST complex.
    
 0.965
ctc1
CST telomere replication complex component 1.
     
 0.944
nhp2
NHP2 ribonucleoprotein.
     
 0.935
dkc1
Dyskerin pseudouridine synthase 1.
     
 0.934
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.