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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002459annotation not available (590 aa)    
Predicted Functional Partners:
ENSCHAP00000054960
Actin related protein 8.
    
 0.806
gtf2h1
General transcription factor IIH subunit 1.
    
 0.783
ENSCHAP00000026594
General transcription factor IIH, polypeptide 3.
    
 0.775
ENSCHAP00000002381
Excision repair cross-complementation group 3.
   
 0.767
ENSCHAP00000047282
Polymerase (RNA) mitochondrial (DNA directed).
    
 0.763
ruvbl1
RuvB like AAA ATPase 1.
    
 0.756
ENSCHAP00000059679
Actin related protein 5.
    
 0.756
LOC105889985
General transcription factor IIH subunit 2-like.
    
 0.740
ckm
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.724
ENSCHAP00000062455
Lysine (K)-specific demethylase 1a.
   
 0.721
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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